Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs4745723 | chr10:75603338 | T/C | 3.89E-6 | 213 | 16.93 | 16.43 | 5.57 | KM Plot |
| KIRP | rs4746145 | chr10:75517987 | T/C | 0 | 212 | 16.45 | 14.95 | 2.47 | KM Plot |
| KIRP | rs4746146 | chr10:75527197 | C/T | 0 | 212 | 16.45 | 14.95 | 2.47 | KM Plot |
| KIRP | rs4746147 | chr10:75527708 | A/G | 0 | 212 | 16.45 | 14.95 | 2.47 | KM Plot |
| KIRP | rs4746151 | chr10:75578720 | G/T | 0 | 212 | 16.53 | 14.95 | 4.07 | KM Plot |
| KIRP | rs4746152 | chr10:75593707 | T/C | 0 | 213 | 16.53 | 17.23 | 4.82 | KM Plot |
| KIRP | rs4746153 | chr10:75598282 | G/C | 0 | 213 | 16.53 | 17.23 | 4.82 | KM Plot |
| KIRP | rs4746154 | chr10:75629396 | G/A | 3.75E-6 | 208 | 15.88 | 19.4 | 5.57 | KM Plot |
| KIRP | rs4746155 | chr10:75661571 | A/G | 0 | 209 | 15.07 | 19.83 | 5.57 | KM Plot |
| KIRP | rs4746338 | chr10:77633775 | C/T | 0 | 214 | 16.97 | 13.18 | 0.72 | KM Plot |
| KIRP | rs4757115 | chr11:13157778 | C/G | 7.09E-6 | 214 | 3.53 | 17.03 | 16.43 | KM Plot |
| KIRP | rs4780830 | chr16:19864321 | G/T | 4.14E-5 | 208 | 15.33 | 16.43 | 16.68 | KM Plot |
| KIRP | rs4782286 | chr16:19834422 | C/T | 0.000668 | 214 | 14.87 | 18.47 | 14.73 | KM Plot |
| KIRP | rs4782287 | chr16:19841340 | T/C | 9.3E-5 | 209 | 15.1 | 16.93 | 15.52 | KM Plot |
| KIRP | rs4782291 | chr16:19864558 | G/A | 5.81E-5 | 213 | 15.08 | 16.93 | 15.58 | KM Plot |